Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cdhr1Q8VHP6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Cdhr1Q8VHP6 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cdhr1Q8VHP6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cdhr1Q8VHP6 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdhr1Q8VHP6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cdhr1Q8VHP6 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 AC122769.4-201ENSMUST00000228166 901 ntBASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cdhr1Q8VHP6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Gm20760-201ENSMUST00000179197 648 ntBASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Gm26524-201ENSMUST00000192339 390 ntBASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Cdhr1Q8VHP6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Gm20049-201ENSMUST00000219950 730 ntBASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cdhr1Q8VHP6 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cdhr1Q8VHP6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cdhr1Q8VHP6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cdhr1Q8VHP6 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms