Protein–RNA interactions for Protein: Q8VEE1

Lmcd1, LIM and cysteine-rich domains protein 1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmcd1Q8VEE1 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lmcd1Q8VEE1 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lmcd1Q8VEE1 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lmcd1Q8VEE1 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.21■□□□□ 0.83
Lmcd1Q8VEE1 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Lmcd1Q8VEE1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Lmcd1Q8VEE1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.21■□□□□ 0.83
Lmcd1Q8VEE1 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lmcd1Q8VEE1 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC20.21■□□□□ 0.83
Lmcd1Q8VEE1 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Gm30025-201ENSMUST00000218555 728 ntBASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lmcd1Q8VEE1 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.19■□□□□ 0.82
Lmcd1Q8VEE1 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Lmcd1Q8VEE1 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Lmcd1Q8VEE1 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lmcd1Q8VEE1 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Lmcd1Q8VEE1 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.16■□□□□ 0.82
Lmcd1Q8VEE1 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Lmcd1Q8VEE1 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.16■□□□□ 0.82
Lmcd1Q8VEE1 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.15■□□□□ 0.82
Lmcd1Q8VEE1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.14■□□□□ 0.82
Lmcd1Q8VEE1 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.82
Lmcd1Q8VEE1 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Lmcd1Q8VEE1 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Lmcd1Q8VEE1 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
Lmcd1Q8VEE1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Lmcd1Q8VEE1 Gm13559-201ENSMUST00000120476 863 ntBASIC20.14■□□□□ 0.81
Lmcd1Q8VEE1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Lmcd1Q8VEE1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Lmcd1Q8VEE1 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Lmcd1Q8VEE1 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lmcd1Q8VEE1 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lmcd1Q8VEE1 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Lmcd1Q8VEE1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Lmcd1Q8VEE1 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lmcd1Q8VEE1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Lmcd1Q8VEE1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Lmcd1Q8VEE1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms