Protein–RNA interactions for Protein: Q8VDP2

UPF0428 protein CXorf56 homolog, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8VDP2 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.38■□□□□ 0.53
Q8VDP2 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC18.38■□□□□ 0.53
Q8VDP2 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.38■□□□□ 0.53
Q8VDP2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Q8VDP2 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC18.38■□□□□ 0.53
Q8VDP2 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Q8VDP2 Dancr-204ENSMUST00000132389 2347 ntBASIC18.38■□□□□ 0.53
Q8VDP2 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Q8VDP2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Q8VDP2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8VDP2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Q8VDP2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8VDP2 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8VDP2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8VDP2 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.37■□□□□ 0.53
Q8VDP2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8VDP2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q8VDP2 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8VDP2 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Q8VDP2 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Q8VDP2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Q8VDP2 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8VDP2 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Q8VDP2 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Q8VDP2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8VDP2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Q8VDP2 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.36■□□□□ 0.53
Q8VDP2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8VDP2 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8VDP2 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8VDP2 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8VDP2 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8VDP2 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Q8VDP2 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Q8VDP2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Q8VDP2 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Q8VDP2 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.35■□□□□ 0.53
Q8VDP2 Gm10420-201ENSMUST00000121713 882 ntBASIC18.35■□□□□ 0.53
Q8VDP2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Q8VDP2 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Q8VDP2 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8VDP2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8VDP2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Q8VDP2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8VDP2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8VDP2 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8VDP2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Q8VDP2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q8VDP2 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Q8VDP2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Q8VDP2 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q8VDP2 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q8VDP2 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Q8VDP2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Q8VDP2 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8VDP2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8VDP2 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8VDP2 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.33■□□□□ 0.52
Q8VDP2 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Q8VDP2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Q8VDP2 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.33■□□□□ 0.52
Q8VDP2 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Q8VDP2 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Q8VDP2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.32■□□□□ 0.52
Q8VDP2 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Q8VDP2 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Q8VDP2 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.32■□□□□ 0.52
Q8VDP2 Gm44428-201ENSMUST00000204474 874 ntBASIC18.32■□□□□ 0.52
Q8VDP2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Q8VDP2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Q8VDP2 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8VDP2 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Q8VDP2 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Q8VDP2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
Q8VDP2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms