Protein–RNA interactions for Protein: Q8VDB9

Slc6a20a, Sodium- and chloride-dependent transporter XTRP3A, mousemouse

Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20aQ8VDB9 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Slc6a20aQ8VDB9 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.63■□□□□ 0.57
Slc6a20aQ8VDB9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Gm43060-201ENSMUST00000200621 289 ntBASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Slc6a20aQ8VDB9 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Slc6a20aQ8VDB9 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Slc6a20aQ8VDB9 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Slc6a20aQ8VDB9 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a20aQ8VDB9 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a20aQ8VDB9 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a20aQ8VDB9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a20aQ8VDB9 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Slc6a20aQ8VDB9 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.58■□□□□ 0.56
Slc6a20aQ8VDB9 Gm2011-201ENSMUST00000203124 1263 ntBASIC18.58■□□□□ 0.56
Slc6a20aQ8VDB9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Slc6a20aQ8VDB9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms