Protein–RNA interactions for Protein: Q8VCS3

Fam20b, Glycosaminoglycan xylosylkinase, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam20bQ8VCS3 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Fam20bQ8VCS3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Fam20bQ8VCS3 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam20bQ8VCS3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam20bQ8VCS3 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Fam20bQ8VCS3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Fam20bQ8VCS3 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Fam20bQ8VCS3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 AA386476-201ENSMUST00000098781 1665 ntBASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Gm44832-201ENSMUST00000208849 2303 ntBASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Fam20bQ8VCS3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Gm40881-201ENSMUST00000223397 166 ntBASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Fam20bQ8VCS3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Dmtn-210ENSMUST00000228824 2377 ntBASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Fam20bQ8VCS3 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 Gm9959-201ENSMUST00000068277 390 ntBASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Fam20bQ8VCS3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Etf1-202ENSMUST00000180351 108 ntBASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Rps24-207ENSMUST00000224568 714 ntBASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Fam20bQ8VCS3 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fam20bQ8VCS3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Fam20bQ8VCS3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fam20bQ8VCS3 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Fam20bQ8VCS3 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Fam20bQ8VCS3 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Fam20bQ8VCS3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms