Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Gm5075-201ENSMUST00000196916 622 ntBASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Dnajc28Q8VCE1 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Dnajc28Q8VCE1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dnajc28Q8VCE1 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Dnajc28Q8VCE1 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dnajc28Q8VCE1 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dnajc28Q8VCE1 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.55■□□□□ 0.88
Dnajc28Q8VCE1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Dnajc28Q8VCE1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dnajc28Q8VCE1 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Dnajc28Q8VCE1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Dnajc28Q8VCE1 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Dnajc28Q8VCE1 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Gm13534-201ENSMUST00000121169 513 ntBASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Dnajc28Q8VCE1 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dnajc28Q8VCE1 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dnajc28Q8VCE1 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dnajc28Q8VCE1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Dnajc28Q8VCE1 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.52■□□□□ 0.88
Dnajc28Q8VCE1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.52■□□□□ 0.88
Dnajc28Q8VCE1 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.52■□□□□ 0.88
Dnajc28Q8VCE1 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Dnajc28Q8VCE1 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Dnajc28Q8VCE1 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Dnajc28Q8VCE1 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Gm12527-201ENSMUST00000117967 564 ntBASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Dnajc28Q8VCE1 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Gm20760-201ENSMUST00000179197 648 ntBASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Dnajc28Q8VCE1 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms