Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slf1Q8R3P9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Yipf2-202ENSMUST00000078572 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Gm14117-201ENSMUST00000122417 843 ntBASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 AC123834.2-201ENSMUST00000224038 2340 ntBASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Slf1Q8R3P9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.03■□□□□ 0.64
Slf1Q8R3P9 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slf1Q8R3P9 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slf1Q8R3P9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slf1Q8R3P9 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slf1Q8R3P9 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.02■□□□□ 0.64
Slf1Q8R3P9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.02■□□□□ 0.64
Slf1Q8R3P9 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slf1Q8R3P9 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.02■□□□□ 0.63
Slf1Q8R3P9 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slf1Q8R3P9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slf1Q8R3P9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.01■□□□□ 0.63
Slf1Q8R3P9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slf1Q8R3P9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Slf1Q8R3P9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slf1Q8R3P9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19■□□□□ 0.63
Slf1Q8R3P9 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slf1Q8R3P9 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slf1Q8R3P9 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Slf1Q8R3P9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Slf1Q8R3P9 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19■□□□□ 0.63
Slf1Q8R3P9 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slf1Q8R3P9 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19■□□□□ 0.63
Slf1Q8R3P9 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Slf1Q8R3P9 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
Slf1Q8R3P9 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.99■□□□□ 0.63
Slf1Q8R3P9 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.99■□□□□ 0.63
Slf1Q8R3P9 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Slf1Q8R3P9 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Slf1Q8R3P9 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slf1Q8R3P9 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Slf1Q8R3P9 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Slf1Q8R3P9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Slf1Q8R3P9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.97■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms