Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pspc1Q8R326 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Pspc1Q8R326 Gm12527-201ENSMUST00000117967 564 ntBASIC21.77■■□□□ 1.08
Pspc1Q8R326 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Pspc1Q8R326 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pspc1Q8R326 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Pspc1Q8R326 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Pspc1Q8R326 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pspc1Q8R326 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pspc1Q8R326 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Pspc1Q8R326 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pspc1Q8R326 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pspc1Q8R326 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC21.74■■□□□ 1.07
Pspc1Q8R326 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.74■■□□□ 1.07
Pspc1Q8R326 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pspc1Q8R326 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.73■■□□□ 1.07
Pspc1Q8R326 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Pspc1Q8R326 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.73■■□□□ 1.07
Pspc1Q8R326 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pspc1Q8R326 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pspc1Q8R326 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC21.72■■□□□ 1.07
Pspc1Q8R326 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.72■■□□□ 1.07
Pspc1Q8R326 Gm20760-201ENSMUST00000179197 648 ntBASIC21.72■■□□□ 1.07
Pspc1Q8R326 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pspc1Q8R326 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pspc1Q8R326 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pspc1Q8R326 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pspc1Q8R326 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.71■■□□□ 1.07
Pspc1Q8R326 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pspc1Q8R326 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Pspc1Q8R326 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.07
Pspc1Q8R326 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 AC122769.4-201ENSMUST00000228166 901 ntBASIC21.7■■□□□ 1.06
Pspc1Q8R326 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pspc1Q8R326 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.69■■□□□ 1.06
Pspc1Q8R326 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pspc1Q8R326 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.69■■□□□ 1.06
Pspc1Q8R326 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.69■■□□□ 1.06
Pspc1Q8R326 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pspc1Q8R326 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pspc1Q8R326 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pspc1Q8R326 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Pspc1Q8R326 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Pspc1Q8R326 Gm20049-201ENSMUST00000219950 730 ntBASIC21.69■■□□□ 1.06
Pspc1Q8R326 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms