Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Chmp7Q8R1T1 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chmp7Q8R1T1 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chmp7Q8R1T1 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chmp7Q8R1T1 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Chmp7Q8R1T1 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chmp7Q8R1T1 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC24.27■■□□□ 1.48
Chmp7Q8R1T1 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Chmp7Q8R1T1 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC24.27■■□□□ 1.48
Chmp7Q8R1T1 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Chmp7Q8R1T1 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Chmp7Q8R1T1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Chmp7Q8R1T1 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
Chmp7Q8R1T1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Chmp7Q8R1T1 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC24.26■■□□□ 1.47
Chmp7Q8R1T1 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Chmp7Q8R1T1 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Chmp7Q8R1T1 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Chmp7Q8R1T1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Chmp7Q8R1T1 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chmp7Q8R1T1 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chmp7Q8R1T1 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chmp7Q8R1T1 Gm13181-201ENSMUST00000120117 1069 ntBASIC24.25■■□□□ 1.47
Chmp7Q8R1T1 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC24.25■■□□□ 1.47
Chmp7Q8R1T1 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chmp7Q8R1T1 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chmp7Q8R1T1 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Chmp7Q8R1T1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Chmp7Q8R1T1 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC24.24■■□□□ 1.47
Chmp7Q8R1T1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Chmp7Q8R1T1 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Chmp7Q8R1T1 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Chmp7Q8R1T1 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Chmp7Q8R1T1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
Chmp7Q8R1T1 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Chmp7Q8R1T1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC24.23■■□□□ 1.47
Chmp7Q8R1T1 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
Chmp7Q8R1T1 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Chmp7Q8R1T1 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chmp7Q8R1T1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Chmp7Q8R1T1 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Chmp7Q8R1T1 Gm19094-201ENSMUST00000209791 1246 ntBASIC24.22■■□□□ 1.47
Chmp7Q8R1T1 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC24.22■■□□□ 1.47
Chmp7Q8R1T1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC24.22■■□□□ 1.47
Chmp7Q8R1T1 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chmp7Q8R1T1 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chmp7Q8R1T1 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Chmp7Q8R1T1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Chmp7Q8R1T1 Dio3-201ENSMUST00000097228 1449 ntBASIC24.21■■□□□ 1.47
Chmp7Q8R1T1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC24.21■■□□□ 1.47
Chmp7Q8R1T1 Gm44549-201ENSMUST00000208351 577 ntBASIC24.21■■□□□ 1.47
Chmp7Q8R1T1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Chmp7Q8R1T1 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Chmp7Q8R1T1 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Chmp7Q8R1T1 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Chmp7Q8R1T1 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Chmp7Q8R1T1 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chmp7Q8R1T1 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chmp7Q8R1T1 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chmp7Q8R1T1 Gm5643-201ENSMUST00000117081 966 ntBASIC24.2■■□□□ 1.46
Chmp7Q8R1T1 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
Chmp7Q8R1T1 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chmp7Q8R1T1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Chmp7Q8R1T1 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Chmp7Q8R1T1 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Chmp7Q8R1T1 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC24.19■■□□□ 1.46
Chmp7Q8R1T1 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC24.19■■□□□ 1.46
Chmp7Q8R1T1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC24.19■■□□□ 1.46
Chmp7Q8R1T1 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Chmp7Q8R1T1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC24.19■■□□□ 1.46
Chmp7Q8R1T1 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC24.19■■□□□ 1.46
Chmp7Q8R1T1 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Chmp7Q8R1T1 Gm43672-201ENSMUST00000199072 1731 ntBASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Gm45640-201ENSMUST00000210665 1896 ntBASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Chmp7Q8R1T1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Chmp7Q8R1T1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms