Protein–RNA interactions for Protein: Q8R0K2

Trim31, E3 ubiquitin-protein ligase TRIM31, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim31Q8R0K2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim31Q8R0K2 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim31Q8R0K2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim31Q8R0K2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trim31Q8R0K2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trim31Q8R0K2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Trim31Q8R0K2 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.54
Trim31Q8R0K2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Trim31Q8R0K2 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.54
Trim31Q8R0K2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Trim31Q8R0K2 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.39■□□□□ 0.54
Trim31Q8R0K2 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim31Q8R0K2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim31Q8R0K2 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.39■□□□□ 0.53
Trim31Q8R0K2 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.39■□□□□ 0.53
Trim31Q8R0K2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trim31Q8R0K2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trim31Q8R0K2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.38■□□□□ 0.53
Trim31Q8R0K2 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.38■□□□□ 0.53
Trim31Q8R0K2 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trim31Q8R0K2 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trim31Q8R0K2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trim31Q8R0K2 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim31Q8R0K2 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim31Q8R0K2 Gm14281-201ENSMUST00000121700 1294 ntBASIC18.35■□□□□ 0.53
Trim31Q8R0K2 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Trim31Q8R0K2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim31Q8R0K2 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim31Q8R0K2 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC18.35■□□□□ 0.53
Trim31Q8R0K2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trim31Q8R0K2 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim31Q8R0K2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim31Q8R0K2 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.33■□□□□ 0.53
Trim31Q8R0K2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim31Q8R0K2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms