Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
Ddx54Q8K4L0 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC24.94■■□□□ 1.58
Ddx54Q8K4L0 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC24.93■■□□□ 1.58
Ddx54Q8K4L0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx54Q8K4L0 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC24.93■■□□□ 1.58
Ddx54Q8K4L0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx54Q8K4L0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx54Q8K4L0 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
Ddx54Q8K4L0 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
Ddx54Q8K4L0 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC24.93■■□□□ 1.58
Ddx54Q8K4L0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.93■■□□□ 1.58
Ddx54Q8K4L0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 Gm13559-201ENSMUST00000120476 863 ntBASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 Gm10517-202ENSMUST00000192970 758 ntBASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
Ddx54Q8K4L0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Arhgef4-208ENSMUST00000211073 171 ntBASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 AC140264.2-202ENSMUST00000218746 817 ntBASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
Ddx54Q8K4L0 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC24.9■■□□□ 1.58
Ddx54Q8K4L0 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx54Q8K4L0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC24.9■■□□□ 1.58
Ddx54Q8K4L0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx54Q8K4L0 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx54Q8K4L0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx54Q8K4L0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
Ddx54Q8K4L0 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx54Q8K4L0 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx54Q8K4L0 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx54Q8K4L0 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx54Q8K4L0 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC24.89■■□□□ 1.58
Ddx54Q8K4L0 Gm11539-201ENSMUST00000119837 557 ntBASIC24.89■■□□□ 1.58
Ddx54Q8K4L0 Gm13436-201ENSMUST00000120418 567 ntBASIC24.89■■□□□ 1.58
Ddx54Q8K4L0 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC24.89■■□□□ 1.58
Ddx54Q8K4L0 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC24.89■■□□□ 1.58
Ddx54Q8K4L0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx54Q8K4L0 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx54Q8K4L0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC24.89■■□□□ 1.57
Ddx54Q8K4L0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC24.89■■□□□ 1.57
Ddx54Q8K4L0 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx54Q8K4L0 Gm11927-201ENSMUST00000118472 759 ntBASIC24.88■■□□□ 1.57
Ddx54Q8K4L0 Gm21814-202ENSMUST00000203277 873 ntBASIC24.88■■□□□ 1.57
Ddx54Q8K4L0 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC24.88■■□□□ 1.57
Ddx54Q8K4L0 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
Ddx54Q8K4L0 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC24.87■■□□□ 1.57
Ddx54Q8K4L0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx54Q8K4L0 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC24.87■■□□□ 1.57
Ddx54Q8K4L0 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx54Q8K4L0 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx54Q8K4L0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx54Q8K4L0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC24.87■■□□□ 1.57
Ddx54Q8K4L0 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
Ddx54Q8K4L0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Gm7889-201ENSMUST00000185591 958 ntBASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
Ddx54Q8K4L0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx54Q8K4L0 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx54Q8K4L0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC24.85■■□□□ 1.57
Ddx54Q8K4L0 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx54Q8K4L0 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC24.85■■□□□ 1.57
Ddx54Q8K4L0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC24.85■■□□□ 1.57
Ddx54Q8K4L0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC24.85■■□□□ 1.57
Ddx54Q8K4L0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC24.85■■□□□ 1.57
Ddx54Q8K4L0 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
Ddx54Q8K4L0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx54Q8K4L0 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx54Q8K4L0 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx54Q8K4L0 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx54Q8K4L0 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx54Q8K4L0 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC24.84■■□□□ 1.57
Ddx54Q8K4L0 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
Ddx54Q8K4L0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC24.84■■□□□ 1.57
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms