Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Col23a1Q8K4G2 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Gm10517-202ENSMUST00000192970 758 ntBASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Wnt10b-205ENSMUST00000226846 1204 ntBASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col23a1Q8K4G2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col23a1Q8K4G2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col23a1Q8K4G2 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Gm7889-201ENSMUST00000185591 958 ntBASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Gm43183-201ENSMUST00000200632 547 ntBASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col23a1Q8K4G2 Flg-201ENSMUST00000050758 1488 ntBASIC23.2■■□□□ 1.3
Col23a1Q8K4G2 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col23a1Q8K4G2 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col23a1Q8K4G2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col23a1Q8K4G2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col23a1Q8K4G2 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col23a1Q8K4G2 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col23a1Q8K4G2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Col23a1Q8K4G2 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Col23a1Q8K4G2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col23a1Q8K4G2 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC23.19■■□□□ 1.3
Col23a1Q8K4G2 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Gm19094-201ENSMUST00000209791 1246 ntBASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 AC107452.1-201ENSMUST00000227963 481 ntBASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Gm32699-201ENSMUST00000221728 1988 ntBASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col23a1Q8K4G2 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC23.17■■□□□ 1.3
Col23a1Q8K4G2 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.17■■□□□ 1.3
Col23a1Q8K4G2 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col23a1Q8K4G2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Col23a1Q8K4G2 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col23a1Q8K4G2 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col23a1Q8K4G2 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col23a1Q8K4G2 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col23a1Q8K4G2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Mtag2-201ENSMUST00000058665 714 ntBASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Col23a1Q8K4G2 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Col23a1Q8K4G2 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC23.15■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms