Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cchcr1Q8K2I2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cchcr1Q8K2I2 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Cchcr1Q8K2I2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cchcr1Q8K2I2 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cchcr1Q8K2I2 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cchcr1Q8K2I2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Cchcr1Q8K2I2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cchcr1Q8K2I2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cchcr1Q8K2I2 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cchcr1Q8K2I2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC22.33■■□□□ 1.16
Cchcr1Q8K2I2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC22.33■■□□□ 1.16
Cchcr1Q8K2I2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC22.33■■□□□ 1.16
Cchcr1Q8K2I2 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cchcr1Q8K2I2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cchcr1Q8K2I2 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cchcr1Q8K2I2 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cchcr1Q8K2I2 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cchcr1Q8K2I2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cchcr1Q8K2I2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cchcr1Q8K2I2 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cchcr1Q8K2I2 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 CT030146.1-201ENSMUST00000220919 217 ntBASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Gm6139-201ENSMUST00000079261 882 ntBASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cchcr1Q8K2I2 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
Cchcr1Q8K2I2 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cchcr1Q8K2I2 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC22.3■■□□□ 1.16
Cchcr1Q8K2I2 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC22.3■■□□□ 1.16
Cchcr1Q8K2I2 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cchcr1Q8K2I2 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cchcr1Q8K2I2 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cchcr1Q8K2I2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cchcr1Q8K2I2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC22.3■■□□□ 1.16
Cchcr1Q8K2I2 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Cchcr1Q8K2I2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC22.29■■□□□ 1.16
Cchcr1Q8K2I2 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC22.29■■□□□ 1.16
Cchcr1Q8K2I2 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cchcr1Q8K2I2 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Cchcr1Q8K2I2 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Cchcr1Q8K2I2 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cchcr1Q8K2I2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC22.28■■□□□ 1.16
Cchcr1Q8K2I2 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cchcr1Q8K2I2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cchcr1Q8K2I2 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC22.28■■□□□ 1.16
Cchcr1Q8K2I2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cchcr1Q8K2I2 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cchcr1Q8K2I2 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Gm26833-201ENSMUST00000180899 440 ntBASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cchcr1Q8K2I2 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Cchcr1Q8K2I2 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Cchcr1Q8K2I2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cchcr1Q8K2I2 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cchcr1Q8K2I2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cchcr1Q8K2I2 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cchcr1Q8K2I2 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cchcr1Q8K2I2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cchcr1Q8K2I2 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cchcr1Q8K2I2 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cchcr1Q8K2I2 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms