Protein–RNA interactions for Protein: Q8K1J6

Trnt1, CCA tRNA nucleotidyltransferase 1, mitochondrial, mousemouse

Predictions only

Length 434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnt1Q8K1J6 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trnt1Q8K1J6 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trnt1Q8K1J6 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trnt1Q8K1J6 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trnt1Q8K1J6 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trnt1Q8K1J6 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Gm38205-201ENSMUST00000192243 258 ntBASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.26■□□□□ 0.51
Trnt1Q8K1J6 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trnt1Q8K1J6 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Trnt1Q8K1J6 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Trnt1Q8K1J6 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Golph3-205ENSMUST00000228671 2842 ntBASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trnt1Q8K1J6 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms