Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Rtn4rl1Q8K0S5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Gm13836-201ENSMUST00000121159 501 ntBASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.21■□□□□ 0.67
Rtn4rl1Q8K0S5 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 H2-K2-201ENSMUST00000174250 1049 ntBASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Rtn4rl1Q8K0S5 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Gm15378-201ENSMUST00000121894 207 ntBASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Rtn4rl1Q8K0S5 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Rtn4rl1Q8K0S5 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Rtn4rl1Q8K0S5 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Mir1199-201ENSMUST00000117015 119 ntBASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Gm15565-201ENSMUST00000118890 427 ntBASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rtn4rl1Q8K0S5 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4rl1Q8K0S5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rtn4rl1Q8K0S5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms