Protein–RNA interactions for Protein: Q8CG47

Smc4, Structural maintenance of chromosomes protein 4, mousemouse

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc4Q8CG47 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Smc4Q8CG47 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC23.31■■□□□ 1.32
Smc4Q8CG47 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC23.31■■□□□ 1.32
Smc4Q8CG47 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc4Q8CG47 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Smc4Q8CG47 Gm26971-201ENSMUST00000182423 1072 ntBASIC23.31■■□□□ 1.32
Smc4Q8CG47 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Smc4Q8CG47 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Smc4Q8CG47 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc4Q8CG47 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc4Q8CG47 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Smc4Q8CG47 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc4Q8CG47 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc4Q8CG47 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC23.3■■□□□ 1.32
Smc4Q8CG47 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC23.3■■□□□ 1.32
Smc4Q8CG47 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc4Q8CG47 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Smc4Q8CG47 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Smc4Q8CG47 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Smc4Q8CG47 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc4Q8CG47 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc4Q8CG47 Gm12669-201ENSMUST00000122162 1009 ntBASIC23.28■■□□□ 1.32
Smc4Q8CG47 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc4Q8CG47 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc4Q8CG47 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc4Q8CG47 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Smc4Q8CG47 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Smc4Q8CG47 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc4Q8CG47 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smc4Q8CG47 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC23.27■■□□□ 1.32
Smc4Q8CG47 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc4Q8CG47 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc4Q8CG47 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Smc4Q8CG47 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Smc4Q8CG47 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Smc4Q8CG47 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc4Q8CG47 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc4Q8CG47 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Smc4Q8CG47 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC23.26■■□□□ 1.31
Smc4Q8CG47 AC112142.1-201ENSMUST00000228796 918 ntBASIC23.26■■□□□ 1.31
Smc4Q8CG47 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Smc4Q8CG47 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Smc4Q8CG47 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Smc4Q8CG47 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.26■■□□□ 1.31
Smc4Q8CG47 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC23.25■■□□□ 1.31
Smc4Q8CG47 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Smc4Q8CG47 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc4Q8CG47 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc4Q8CG47 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc4Q8CG47 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Smc4Q8CG47 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
Smc4Q8CG47 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Smc4Q8CG47 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
Smc4Q8CG47 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc4Q8CG47 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Smc4Q8CG47 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Smc4Q8CG47 Gm37352-201ENSMUST00000193908 2181 ntBASIC23.23■■□□□ 1.31
Smc4Q8CG47 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Smc4Q8CG47 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc4Q8CG47 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc4Q8CG47 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc4Q8CG47 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Smc4Q8CG47 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc4Q8CG47 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC23.22■■□□□ 1.31
Smc4Q8CG47 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Smc4Q8CG47 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc4Q8CG47 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Smc4Q8CG47 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Smc4Q8CG47 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Smc4Q8CG47 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
Smc4Q8CG47 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms