Protein–RNA interactions for Protein: Q8CFL8

Zswim3, Zinc finger SWIM domain-containing protein 3, mousemouse

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zswim3Q8CFL8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Zswim3Q8CFL8 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
Zswim3Q8CFL8 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.83■□□□□ 0.92
Zswim3Q8CFL8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Zswim3Q8CFL8 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 Gm21362-201ENSMUST00000194272 928 ntBASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
Zswim3Q8CFL8 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Gm5417-201ENSMUST00000079706 384 ntBASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Zswim3Q8CFL8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Zswim3Q8CFL8 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Zswim3Q8CFL8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Zswim3Q8CFL8 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.78■□□□□ 0.92
Zswim3Q8CFL8 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC20.78■□□□□ 0.92
Zswim3Q8CFL8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC20.78■□□□□ 0.92
Zswim3Q8CFL8 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.78■□□□□ 0.92
Zswim3Q8CFL8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC20.78■□□□□ 0.92
Zswim3Q8CFL8 Gm10459-201ENSMUST00000202708 1155 ntBASIC20.78■□□□□ 0.92
Zswim3Q8CFL8 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.78■□□□□ 0.92
Zswim3Q8CFL8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zswim3Q8CFL8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Zswim3Q8CFL8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
Zswim3Q8CFL8 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zswim3Q8CFL8 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.77■□□□□ 0.92
Zswim3Q8CFL8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zswim3Q8CFL8 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Zswim3Q8CFL8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Zswim3Q8CFL8 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Zswim3Q8CFL8 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Zswim3Q8CFL8 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Zswim3Q8CFL8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zswim3Q8CFL8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.74■□□□□ 0.91
Zswim3Q8CFL8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zswim3Q8CFL8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Zswim3Q8CFL8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Zswim3Q8CFL8 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
Zswim3Q8CFL8 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms