Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Gm10571-201ENSMUST00000097869 1638 ntBASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Ccdc28bQ8CEG5 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc28bQ8CEG5 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc28bQ8CEG5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc28bQ8CEG5 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc28bQ8CEG5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc28bQ8CEG5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.65■□□□□ 0.58
Ccdc28bQ8CEG5 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc28bQ8CEG5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc28bQ8CEG5 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Ccdc28bQ8CEG5 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc28bQ8CEG5 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc28bQ8CEG5 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Ccdc28bQ8CEG5 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.64■□□□□ 0.58
Ccdc28bQ8CEG5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.64■□□□□ 0.57
Ccdc28bQ8CEG5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc28bQ8CEG5 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.64■□□□□ 0.57
Ccdc28bQ8CEG5 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc28bQ8CEG5 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc28bQ8CEG5 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Ccdc28bQ8CEG5 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC18.64■□□□□ 0.57
Ccdc28bQ8CEG5 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
Ccdc28bQ8CEG5 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc28bQ8CEG5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc28bQ8CEG5 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.63■□□□□ 0.57
Ccdc28bQ8CEG5 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc28bQ8CEG5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Ccdc28bQ8CEG5 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Ccdc28bQ8CEG5 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Ccdc28bQ8CEG5 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Gm7417-201ENSMUST00000192950 473 ntBASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Ccdc28bQ8CEG5 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Ccdc28bQ8CEG5 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.58■□□□□ 0.57
Ccdc28bQ8CEG5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Ccdc28bQ8CEG5 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.57
Ccdc28bQ8CEG5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Ccdc28bQ8CEG5 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 318 ms