Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Gm44549-201ENSMUST00000208351 577 ntBASIC23.54■■□□□ 1.36
Trim52Q8CDV4 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim52Q8CDV4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Trim52Q8CDV4 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trim52Q8CDV4 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Trim52Q8CDV4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim52Q8CDV4 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim52Q8CDV4 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim52Q8CDV4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim52Q8CDV4 Gm2559-201ENSMUST00000201323 363 ntBASIC23.53■■□□□ 1.36
Trim52Q8CDV4 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC23.53■■□□□ 1.36
Trim52Q8CDV4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim52Q8CDV4 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim52Q8CDV4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trim52Q8CDV4 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Trim52Q8CDV4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
Trim52Q8CDV4 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim52Q8CDV4 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC23.5■■□□□ 1.35
Trim52Q8CDV4 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trim52Q8CDV4 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC23.5■■□□□ 1.35
Trim52Q8CDV4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Trim52Q8CDV4 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC23.5■■□□□ 1.35
Trim52Q8CDV4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
Trim52Q8CDV4 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Gm10252-201ENSMUST00000209541 832 ntBASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trim52Q8CDV4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Trim52Q8CDV4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim52Q8CDV4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Trim52Q8CDV4 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Trim52Q8CDV4 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Trim52Q8CDV4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim52Q8CDV4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim52Q8CDV4 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC23.47■■□□□ 1.35
Trim52Q8CDV4 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Trim52Q8CDV4 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim52Q8CDV4 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Trim52Q8CDV4 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trim52Q8CDV4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim52Q8CDV4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Trim52Q8CDV4 AC160393.1-201ENSMUST00000218378 1279 ntBASIC23.46■■□□□ 1.35
Trim52Q8CDV4 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim52Q8CDV4 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim52Q8CDV4 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim52Q8CDV4 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Trim52Q8CDV4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Trim52Q8CDV4 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trim52Q8CDV4 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Trim52Q8CDV4 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Gm5643-201ENSMUST00000117081 966 ntBASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Gm10812-201ENSMUST00000099864 546 ntBASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Trim52Q8CDV4 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Trim52Q8CDV4 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Trim52Q8CDV4 AC124603.1-201ENSMUST00000223843 308 ntBASIC23.44■■□□□ 1.34
Trim52Q8CDV4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trim52Q8CDV4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Trim52Q8CDV4 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC23.44■■□□□ 1.34
Trim52Q8CDV4 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Trim52Q8CDV4 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms