Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Smad6-203ENSMUST00000179458 273 ntBASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.27■□□□□ 0.84
Vcpip1Q8CDG3 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Vcpip1Q8CDG3 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.83
Vcpip1Q8CDG3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Gm43173-201ENSMUST00000202246 593 ntBASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Vcpip1Q8CDG3 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcpip1Q8CDG3 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcpip1Q8CDG3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcpip1Q8CDG3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.25■□□□□ 0.83
Vcpip1Q8CDG3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vcpip1Q8CDG3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Vcpip1Q8CDG3 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Vcpip1Q8CDG3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Rarb-207ENSMUST00000225921 2756 ntBASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Gm8493-201ENSMUST00000196881 489 ntBASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Vcpip1Q8CDG3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Vcpip1Q8CDG3 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Vcpip1Q8CDG3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Vcpip1Q8CDG3 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms