Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.95■□□□□ 0.3
Lysmd4Q8CC84 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 Gm9959-201ENSMUST00000068277 390 ntBASIC16.94■□□□□ 0.3
Lysmd4Q8CC84 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Lysmd4Q8CC84 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Lysmd4Q8CC84 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC16.91■□□□□ 0.3
Lysmd4Q8CC84 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 AC093043.1-201ENSMUST00000226700 898 ntBASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.9■□□□□ 0.3
Lysmd4Q8CC84 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lysmd4Q8CC84 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lysmd4Q8CC84 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd4Q8CC84 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd4Q8CC84 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
Lysmd4Q8CC84 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd4Q8CC84 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lysmd4Q8CC84 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd4Q8CC84 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd4Q8CC84 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lysmd4Q8CC84 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd4Q8CC84 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd4Q8CC84 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lysmd4Q8CC84 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.88■□□□□ 0.29
Lysmd4Q8CC84 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms