Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Rfx6Q8C7R7 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Rfx6Q8C7R7 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.14■□□□□ 0.66
Rfx6Q8C7R7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Rfx6Q8C7R7 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Rfx6Q8C7R7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx6Q8C7R7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.14■□□□□ 0.65
Rfx6Q8C7R7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx6Q8C7R7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx6Q8C7R7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Rfx6Q8C7R7 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Rfx6Q8C7R7 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Rfx6Q8C7R7 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Spcs1-204ENSMUST00000226782 949 ntBASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Rfx6Q8C7R7 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rfx6Q8C7R7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rfx6Q8C7R7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Gm43137-201ENSMUST00000198052 594 ntBASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rfx6Q8C7R7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms