Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC23.34■■□□□ 1.33
Ptcd1Q8C2E4 AC154266.1-201ENSMUST00000223190 503 ntBASIC23.34■■□□□ 1.33
Ptcd1Q8C2E4 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Ptcd1Q8C2E4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Ptcd1Q8C2E4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Ptcd1Q8C2E4 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Ptcd1Q8C2E4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptcd1Q8C2E4 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.33■■□□□ 1.33
Ptcd1Q8C2E4 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Ptcd1Q8C2E4 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ptcd1Q8C2E4 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Ptcd1Q8C2E4 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC23.33■■□□□ 1.32
Ptcd1Q8C2E4 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Ptcd1Q8C2E4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ptcd1Q8C2E4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptcd1Q8C2E4 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ptcd1Q8C2E4 Gm715-201ENSMUST00000117865 831 ntBASIC23.32■■□□□ 1.32
Ptcd1Q8C2E4 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC23.32■■□□□ 1.32
Ptcd1Q8C2E4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Ptcd1Q8C2E4 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Ptcd1Q8C2E4 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Ptcd1Q8C2E4 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd1Q8C2E4 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd1Q8C2E4 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd1Q8C2E4 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd1Q8C2E4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd1Q8C2E4 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC23.31■■□□□ 1.32
Ptcd1Q8C2E4 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC23.31■■□□□ 1.32
Ptcd1Q8C2E4 AA386476-201ENSMUST00000098781 1665 ntBASIC23.31■■□□□ 1.32
Ptcd1Q8C2E4 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Ptcd1Q8C2E4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Gm13509-201ENSMUST00000119733 1308 ntBASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Ptcd1Q8C2E4 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptcd1Q8C2E4 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptcd1Q8C2E4 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ptcd1Q8C2E4 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptcd1Q8C2E4 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Ptcd1Q8C2E4 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ptcd1Q8C2E4 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Ptcd1Q8C2E4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Ptcd1Q8C2E4 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Gm2559-201ENSMUST00000201323 363 ntBASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Ptcd1Q8C2E4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd1Q8C2E4 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd1Q8C2E4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd1Q8C2E4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Ptcd1Q8C2E4 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Ptcd1Q8C2E4 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptcd1Q8C2E4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC23.26■■□□□ 1.31
Ptcd1Q8C2E4 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptcd1Q8C2E4 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptcd1Q8C2E4 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Ptcd1Q8C2E4 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC23.26■■□□□ 1.31
Ptcd1Q8C2E4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC23.26■■□□□ 1.31
Ptcd1Q8C2E4 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC23.26■■□□□ 1.31
Ptcd1Q8C2E4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC23.26■■□□□ 1.31
Ptcd1Q8C2E4 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 AC154649.1-201ENSMUST00000227392 384 ntBASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Ptcd1Q8C2E4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Gm7860-201ENSMUST00000121190 879 ntBASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Ptcd1Q8C2E4 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC23.24■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms