Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
Vps9d1Q8C190 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps9d1Q8C190 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Vps9d1Q8C190 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Vps9d1Q8C190 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Vps9d1Q8C190 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Vps9d1Q8C190 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps9d1Q8C190 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.62■□□□□ 0.41
Vps9d1Q8C190 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.62■□□□□ 0.41
Vps9d1Q8C190 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps9d1Q8C190 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Vps9d1Q8C190 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps9d1Q8C190 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
Vps9d1Q8C190 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Vps9d1Q8C190 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Vps9d1Q8C190 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Vps9d1Q8C190 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps9d1Q8C190 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps9d1Q8C190 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps9d1Q8C190 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Vps9d1Q8C190 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps9d1Q8C190 Serp2-204ENSMUST00000228055 705 ntBASIC17.6■□□□□ 0.41
Vps9d1Q8C190 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps9d1Q8C190 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Vps9d1Q8C190 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Vps9d1Q8C190 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps9d1Q8C190 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Vps9d1Q8C190 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Vps9d1Q8C190 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Vps9d1Q8C190 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Vps9d1Q8C190 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms