Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Slc44a2Q8BY89 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc44a2Q8BY89 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Slc44a2Q8BY89 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
Slc44a2Q8BY89 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.33■□□□□ 0.53
Slc44a2Q8BY89 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
Slc44a2Q8BY89 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Slc44a2Q8BY89 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Slc44a2Q8BY89 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Slc44a2Q8BY89 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
Slc44a2Q8BY89 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Slc44a2Q8BY89 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Slc44a2Q8BY89 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms