Protein–RNA interactions for Protein: Q8BY02

Nkrf, NF-kappa-B-repressing factor, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NkrfQ8BY02 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
NkrfQ8BY02 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NkrfQ8BY02 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
NkrfQ8BY02 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NkrfQ8BY02 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NkrfQ8BY02 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
NkrfQ8BY02 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.19■□□□□ 0.98
NkrfQ8BY02 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NkrfQ8BY02 AC135637.1-201ENSMUST00000227750 365 ntBASIC21.19■□□□□ 0.98
NkrfQ8BY02 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
NkrfQ8BY02 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
NkrfQ8BY02 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
NkrfQ8BY02 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Gm13168-201ENSMUST00000121771 632 ntBASIC21.18■□□□□ 0.98
NkrfQ8BY02 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
NkrfQ8BY02 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.17■□□□□ 0.98
NkrfQ8BY02 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Gm26524-201ENSMUST00000192339 390 ntBASIC21.17■□□□□ 0.98
NkrfQ8BY02 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NkrfQ8BY02 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
NkrfQ8BY02 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NkrfQ8BY02 AC131586.2-201ENSMUST00000228370 1512 ntBASIC21.16■□□□□ 0.98
NkrfQ8BY02 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
NkrfQ8BY02 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.15■□□□□ 0.98
NkrfQ8BY02 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NkrfQ8BY02 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NkrfQ8BY02 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
NkrfQ8BY02 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
NkrfQ8BY02 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NkrfQ8BY02 Gm37856-201ENSMUST00000191634 999 ntBASIC21.15■□□□□ 0.98
NkrfQ8BY02 Rab3c-203ENSMUST00000224180 967 ntBASIC21.15■□□□□ 0.98
NkrfQ8BY02 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
NkrfQ8BY02 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NkrfQ8BY02 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.14■□□□□ 0.98
NkrfQ8BY02 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
NkrfQ8BY02 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
NkrfQ8BY02 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC21.14■□□□□ 0.97
NkrfQ8BY02 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
NkrfQ8BY02 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
NkrfQ8BY02 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
NkrfQ8BY02 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
NkrfQ8BY02 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.13■□□□□ 0.97
NkrfQ8BY02 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21.13■□□□□ 0.97
NkrfQ8BY02 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NkrfQ8BY02 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NkrfQ8BY02 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC21.12■□□□□ 0.97
NkrfQ8BY02 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
NkrfQ8BY02 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NkrfQ8BY02 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
NkrfQ8BY02 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
NkrfQ8BY02 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.12■□□□□ 0.97
NkrfQ8BY02 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
NkrfQ8BY02 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
NkrfQ8BY02 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
NkrfQ8BY02 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
NkrfQ8BY02 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms