Protein–RNA interactions for Protein: Q8BSM7

Slc43a1, Large neutral amino acids transporter small subunit 3, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc43a1Q8BSM7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Slc43a1Q8BSM7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
Slc43a1Q8BSM7 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Slc43a1Q8BSM7 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Slc43a1Q8BSM7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Gm37856-201ENSMUST00000191634 999 ntBASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Slc43a1Q8BSM7 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Gm13168-201ENSMUST00000121771 632 ntBASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Trmt13-210ENSMUST00000198454 880 ntBASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Slc43a1Q8BSM7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Slc43a1Q8BSM7 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Slc43a1Q8BSM7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc43a1Q8BSM7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Slc43a1Q8BSM7 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc43a1Q8BSM7 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc43a1Q8BSM7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.05■□□□□ 0.64
Slc43a1Q8BSM7 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc43a1Q8BSM7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Slc43a1Q8BSM7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.04■□□□□ 0.64
Slc43a1Q8BSM7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc43a1Q8BSM7 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc43a1Q8BSM7 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.03■□□□□ 0.64
Slc43a1Q8BSM7 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
Slc43a1Q8BSM7 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc43a1Q8BSM7 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC19.03■□□□□ 0.64
Slc43a1Q8BSM7 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc43a1Q8BSM7 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Slc43a1Q8BSM7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Slc43a1Q8BSM7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc43a1Q8BSM7 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.02■□□□□ 0.63
Slc43a1Q8BSM7 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slc43a1Q8BSM7 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Slc43a1Q8BSM7 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Slc43a1Q8BSM7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Slc43a1Q8BSM7 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Slc43a1Q8BSM7 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Slc43a1Q8BSM7 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms