Protein–RNA interactions for Protein: Q8BRN9

Cc2d1b, Coiled-coil and C2 domain-containing protein 1B, mousemouse

Predictions only

Length 848 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1bQ8BRN9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cc2d1bQ8BRN9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cc2d1bQ8BRN9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cc2d1bQ8BRN9 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Cc2d1bQ8BRN9 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cc2d1bQ8BRN9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cc2d1bQ8BRN9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cc2d1bQ8BRN9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cc2d1bQ8BRN9 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cc2d1bQ8BRN9 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cc2d1bQ8BRN9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cc2d1bQ8BRN9 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cc2d1bQ8BRN9 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cc2d1bQ8BRN9 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.83■□□□□ 0.93
Cc2d1bQ8BRN9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Cc2d1bQ8BRN9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cc2d1bQ8BRN9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cc2d1bQ8BRN9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Cc2d1bQ8BRN9 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cc2d1bQ8BRN9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cc2d1bQ8BRN9 AC122335.2-201ENSMUST00000213901 6181 ntBASIC20.8■□□□□ 0.92
Cc2d1bQ8BRN9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cc2d1bQ8BRN9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cc2d1bQ8BRN9 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cc2d1bQ8BRN9 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cc2d1bQ8BRN9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cc2d1bQ8BRN9 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
Cc2d1bQ8BRN9 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.8■□□□□ 0.92
Cc2d1bQ8BRN9 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cc2d1bQ8BRN9 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms