Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Cpsf4Q8BQZ5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Gm8495-201ENSMUST00000188740 694 ntBASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Cpsf4Q8BQZ5 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.27■□□□□ 0.52
Cpsf4Q8BQZ5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf4Q8BQZ5 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cpsf4Q8BQZ5 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cpsf4Q8BQZ5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cpsf4Q8BQZ5 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Gm5874-201ENSMUST00000096101 508 ntBASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Cpsf4Q8BQZ5 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cpsf4Q8BQZ5 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms