Protein–RNA interactions for Protein: Q8BQM7

Smco3, Single-pass membrane and coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco3Q8BQM7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Smco3Q8BQM7 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Gm5540-201ENSMUST00000131852 1848 ntBASIC15.57■□□□□ 0.08
Smco3Q8BQM7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Smco3Q8BQM7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC15.55■□□□□ 0.08
Smco3Q8BQM7 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Smco3Q8BQM7 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Smco3Q8BQM7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC15.52■□□□□ 0.08
Smco3Q8BQM7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Smco3Q8BQM7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms