Protein–RNA interactions for Protein: Q8BP99

UPF0500 protein C1orf216 homolog, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BP99 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Q8BP99 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Q8BP99 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.55■□□□□ 0.56
Q8BP99 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC18.55■□□□□ 0.56
Q8BP99 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Q8BP99 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Q8BP99 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Q8BP99 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
Q8BP99 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Q8BP99 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Q8BP99 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.54■□□□□ 0.56
Q8BP99 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Q8BP99 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
Q8BP99 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.54■□□□□ 0.56
Q8BP99 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Q8BP99 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Q8BP99 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC18.53■□□□□ 0.56
Q8BP99 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Q8BP99 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
Q8BP99 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.53■□□□□ 0.56
Q8BP99 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Q8BP99 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Q8BP99 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q8BP99 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q8BP99 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q8BP99 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
Q8BP99 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q8BP99 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Q8BP99 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Q8BP99 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Q8BP99 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Q8BP99 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Q8BP99 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Q8BP99 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8BP99 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q8BP99 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8BP99 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
Q8BP99 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q8BP99 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Q8BP99 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.51■□□□□ 0.55
Q8BP99 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.51■□□□□ 0.55
Q8BP99 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8BP99 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Q8BP99 BC021767-201ENSMUST00000126387 1716 ntBASIC18.51■□□□□ 0.55
Q8BP99 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.51■□□□□ 0.55
Q8BP99 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Q8BP99 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Q8BP99 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8BP99 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
Q8BP99 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.5■□□□□ 0.55
Q8BP99 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.5■□□□□ 0.55
Q8BP99 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Q8BP99 Smad6-203ENSMUST00000179458 273 ntBASIC18.5■□□□□ 0.55
Q8BP99 Gm26833-201ENSMUST00000180899 440 ntBASIC18.5■□□□□ 0.55
Q8BP99 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.5■□□□□ 0.55
Q8BP99 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Q8BP99 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms