Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC25.16■■□□□ 1.62
Col16a1Q8BLX7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Col16a1Q8BLX7 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Col16a1Q8BLX7 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
Col16a1Q8BLX7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
Col16a1Q8BLX7 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Col16a1Q8BLX7 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 Mir5122-201ENSMUST00000175004 89 ntBASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Col16a1Q8BLX7 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Col16a1Q8BLX7 Gm15378-201ENSMUST00000121894 207 ntBASIC25.14■■□□□ 1.62
Col16a1Q8BLX7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC25.14■■□□□ 1.62
Col16a1Q8BLX7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Col16a1Q8BLX7 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Col16a1Q8BLX7 Gm10167-201ENSMUST00000150411 1479 ntBASIC25.14■■□□□ 1.62
Col16a1Q8BLX7 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC25.14■■□□□ 1.62
Col16a1Q8BLX7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Col16a1Q8BLX7 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
Col16a1Q8BLX7 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
Col16a1Q8BLX7 Gm45640-201ENSMUST00000210665 1896 ntBASIC25.13■■□□□ 1.61
Col16a1Q8BLX7 CT010444.2-201ENSMUST00000217877 1629 ntBASIC25.13■■□□□ 1.61
Col16a1Q8BLX7 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Col16a1Q8BLX7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Col16a1Q8BLX7 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Col16a1Q8BLX7 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Col16a1Q8BLX7 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC25.13■■□□□ 1.61
Col16a1Q8BLX7 Gm37352-201ENSMUST00000193908 2181 ntBASIC25.13■■□□□ 1.61
Col16a1Q8BLX7 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
Col16a1Q8BLX7 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC25.12■■□□□ 1.61
Col16a1Q8BLX7 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Col16a1Q8BLX7 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC25.11■■□□□ 1.61
Col16a1Q8BLX7 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC25.11■■□□□ 1.61
Col16a1Q8BLX7 AC140264.2-202ENSMUST00000218746 817 ntBASIC25.11■■□□□ 1.61
Col16a1Q8BLX7 Gm5540-201ENSMUST00000131852 1848 ntBASIC25.11■■□□□ 1.61
Col16a1Q8BLX7 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Col16a1Q8BLX7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 AC121577.1-201ENSMUST00000227302 707 ntBASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC25.1■■□□□ 1.61
Col16a1Q8BLX7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Col16a1Q8BLX7 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Col16a1Q8BLX7 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
Col16a1Q8BLX7 Gm13158-201ENSMUST00000122007 736 ntBASIC25.09■■□□□ 1.61
Col16a1Q8BLX7 H2-K2-201ENSMUST00000174250 1049 ntBASIC25.09■■□□□ 1.61
Col16a1Q8BLX7 Gm20472-201ENSMUST00000174403 1240 ntBASIC25.09■■□□□ 1.61
Col16a1Q8BLX7 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
Col16a1Q8BLX7 Gm9987-201ENSMUST00000069768 567 ntBASIC25.09■■□□□ 1.61
Col16a1Q8BLX7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Col16a1Q8BLX7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC25.08■■□□□ 1.61
Col16a1Q8BLX7 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC25.08■■□□□ 1.61
Col16a1Q8BLX7 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Col16a1Q8BLX7 AC153881.2-201ENSMUST00000214877 204 ntBASIC25.08■■□□□ 1.61
Col16a1Q8BLX7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Col16a1Q8BLX7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Col16a1Q8BLX7 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Col16a1Q8BLX7 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Col16a1Q8BLX7 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Col16a1Q8BLX7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Col16a1Q8BLX7 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC25.07■■□□□ 1.6
Col16a1Q8BLX7 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Col16a1Q8BLX7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Col16a1Q8BLX7 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC25.07■■□□□ 1.6
Col16a1Q8BLX7 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 AC175538.1-201ENSMUST00000225343 1269 ntBASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC25.06■■□□□ 1.6
Col16a1Q8BLX7 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms