Protein–RNA interactions for Protein: Q8BJQ2

Usp1, Ubiquitin carboxyl-terminal hydrolase 1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp1Q8BJQ2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp1Q8BJQ2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp1Q8BJQ2 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp1Q8BJQ2 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
Usp1Q8BJQ2 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp1Q8BJQ2 AC131586.2-201ENSMUST00000228370 1512 ntBASIC20.05■□□□□ 0.8
Usp1Q8BJQ2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Usp1Q8BJQ2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp1Q8BJQ2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Usp1Q8BJQ2 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Usp1Q8BJQ2 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.03■□□□□ 0.8
Usp1Q8BJQ2 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 Gm13168-201ENSMUST00000121771 632 ntBASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 Rab3c-203ENSMUST00000224180 967 ntBASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Usp1Q8BJQ2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Usp1Q8BJQ2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Usp1Q8BJQ2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Usp1Q8BJQ2 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20■□□□□ 0.79
Usp1Q8BJQ2 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC20■□□□□ 0.79
Usp1Q8BJQ2 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
Usp1Q8BJQ2 Gm37856-201ENSMUST00000191634 999 ntBASIC20■□□□□ 0.79
Usp1Q8BJQ2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
Usp1Q8BJQ2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC20■□□□□ 0.79
Usp1Q8BJQ2 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20■□□□□ 0.79
Usp1Q8BJQ2 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Usp1Q8BJQ2 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Usp1Q8BJQ2 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Usp1Q8BJQ2 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.97■□□□□ 0.79
Usp1Q8BJQ2 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Usp1Q8BJQ2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms