Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Chmp2bQ8BJF9 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
Chmp2bQ8BJF9 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2bQ8BJF9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Chmp2bQ8BJF9 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2bQ8BJF9 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.27■□□□□ 0.68
Chmp2bQ8BJF9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2bQ8BJF9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2bQ8BJF9 Spcs1-204ENSMUST00000226782 949 ntBASIC19.27■□□□□ 0.68
Chmp2bQ8BJF9 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Chmp2bQ8BJF9 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.67
Chmp2bQ8BJF9 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Chmp2bQ8BJF9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2bQ8BJF9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.26■□□□□ 0.67
Chmp2bQ8BJF9 Gm43137-201ENSMUST00000198052 594 ntBASIC19.26■□□□□ 0.67
Chmp2bQ8BJF9 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.26■□□□□ 0.67
Chmp2bQ8BJF9 Gm9847-201ENSMUST00000052528 599 ntBASIC19.26■□□□□ 0.67
Chmp2bQ8BJF9 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Chmp2bQ8BJF9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Chmp2bQ8BJF9 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Gm12251-201ENSMUST00000117893 792 ntBASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Chmp2bQ8BJF9 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Chmp2bQ8BJF9 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Chmp2bQ8BJF9 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.21■□□□□ 0.67
Chmp2bQ8BJF9 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Chmp2bQ8BJF9 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms