Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ccdc40Q8BI79 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc40Q8BI79 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ccdc40Q8BI79 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc40Q8BI79 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc40Q8BI79 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ccdc40Q8BI79 Hat1-202ENSMUST00000112122 1899 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Ccdc40Q8BI79 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc40Q8BI79 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc40Q8BI79 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc40Q8BI79 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Gm26833-201ENSMUST00000180899 440 ntBASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Ccdc40Q8BI79 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Gm43017-201ENSMUST00000198296 752 ntBASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc40Q8BI79 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Gm27801-201ENSMUST00000184174 223 ntBASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.54■□□□□ 0.72
Ccdc40Q8BI79 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc40Q8BI79 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc40Q8BI79 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc40Q8BI79 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc40Q8BI79 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc40Q8BI79 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc40Q8BI79 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.52■□□□□ 0.72
Ccdc40Q8BI79 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.52■□□□□ 0.72
Ccdc40Q8BI79 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms