Protein–RNA interactions for Protein: Q8BGA5

Krr1, KRR1 small subunit processome component homolog, mousemouse

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krr1Q8BGA5 Gm45141-201ENSMUST00000206502 1888 ntBASIC17.82■□□□□ 0.44
Krr1Q8BGA5 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krr1Q8BGA5 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krr1Q8BGA5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krr1Q8BGA5 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krr1Q8BGA5 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.82■□□□□ 0.44
Krr1Q8BGA5 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krr1Q8BGA5 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Krr1Q8BGA5 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Krr1Q8BGA5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC17.82■□□□□ 0.44
Krr1Q8BGA5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.81■□□□□ 0.44
Krr1Q8BGA5 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Krr1Q8BGA5 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Krr1Q8BGA5 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Ddx41-204ENSMUST00000224765 2199 ntBASIC17.79■□□□□ 0.44
Krr1Q8BGA5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.78■□□□□ 0.44
Krr1Q8BGA5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Gm20100-201ENSMUST00000209418 2272 ntBASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Krr1Q8BGA5 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.77■□□□□ 0.43
Krr1Q8BGA5 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Krr1Q8BGA5 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krr1Q8BGA5 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Krr1Q8BGA5 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Krr1Q8BGA5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Krr1Q8BGA5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Krr1Q8BGA5 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms