Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.58■□□□□ 0.89
Sh3tc2Q80VA5 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3tc2Q80VA5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Sh3tc2Q80VA5 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sh3tc2Q80VA5 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sh3tc2Q80VA5 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Gm26524-201ENSMUST00000192339 390 ntBASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sh3tc2Q80VA5 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Gm7977-201ENSMUST00000193787 748 ntBASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Sh3tc2Q80VA5 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Sh3tc2Q80VA5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Gm27275-201ENSMUST00000184318 272 ntBASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Gm29241-201ENSMUST00000189260 1096 ntBASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Sh3tc2Q80VA5 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 AC154266.1-201ENSMUST00000223190 503 ntBASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 Rab3c-203ENSMUST00000224180 967 ntBASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 Golph3-202ENSMUST00000226517 2359 ntBASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Sh3tc2Q80VA5 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Sh3tc2Q80VA5 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc2Q80VA5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Sh3tc2Q80VA5 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc2Q80VA5 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc2Q80VA5 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Sh3tc2Q80VA5 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc2Q80VA5 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc2Q80VA5 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc2Q80VA5 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc2Q80VA5 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Sh3tc2Q80VA5 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms