Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
Rpap1Q80TE0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rpap1Q80TE0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rpap1Q80TE0 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC29.62■■■□□ 2.33
Rpap1Q80TE0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rpap1Q80TE0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rpap1Q80TE0 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC29.62■■■□□ 2.33
Rpap1Q80TE0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
Rpap1Q80TE0 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rpap1Q80TE0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC29.62■■■□□ 2.33
Rpap1Q80TE0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rpap1Q80TE0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rpap1Q80TE0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rpap1Q80TE0 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rpap1Q80TE0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC29.61■■■□□ 2.33
Rpap1Q80TE0 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rpap1Q80TE0 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC29.61■■■□□ 2.33
Rpap1Q80TE0 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Rpap1Q80TE0 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Rpap1Q80TE0 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rpap1Q80TE0 Gm15847-201ENSMUST00000121417 1065 ntBASIC29.6■■■□□ 2.33
Rpap1Q80TE0 Gm13158-201ENSMUST00000122007 736 ntBASIC29.6■■■□□ 2.33
Rpap1Q80TE0 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC29.6■■■□□ 2.33
Rpap1Q80TE0 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC29.6■■■□□ 2.33
Rpap1Q80TE0 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rpap1Q80TE0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rpap1Q80TE0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Rpap1Q80TE0 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rpap1Q80TE0 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC29.59■■■□□ 2.33
Rpap1Q80TE0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rpap1Q80TE0 H2-K2-201ENSMUST00000174250 1049 ntBASIC29.59■■■□□ 2.33
Rpap1Q80TE0 Gm20472-201ENSMUST00000174403 1240 ntBASIC29.59■■■□□ 2.33
Rpap1Q80TE0 AC153881.2-201ENSMUST00000214877 204 ntBASIC29.59■■■□□ 2.33
Rpap1Q80TE0 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC29.59■■■□□ 2.33
Rpap1Q80TE0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Rpap1Q80TE0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC29.58■■■□□ 2.33
Rpap1Q80TE0 Mir5122-201ENSMUST00000175004 89 ntBASIC29.58■■■□□ 2.33
Rpap1Q80TE0 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC29.58■■■□□ 2.33
Rpap1Q80TE0 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
Rpap1Q80TE0 Gm9987-201ENSMUST00000069768 567 ntBASIC29.58■■■□□ 2.33
Rpap1Q80TE0 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rpap1Q80TE0 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
Rpap1Q80TE0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rpap1Q80TE0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC29.57■■■□□ 2.32
Rpap1Q80TE0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC29.57■■■□□ 2.32
Rpap1Q80TE0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC29.57■■■□□ 2.32
Rpap1Q80TE0 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC29.57■■■□□ 2.32
Rpap1Q80TE0 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rpap1Q80TE0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rpap1Q80TE0 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC29.57■■■□□ 2.32
Rpap1Q80TE0 Gm10167-201ENSMUST00000150411 1479 ntBASIC29.57■■■□□ 2.32
Rpap1Q80TE0 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Rpap1Q80TE0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Rpap1Q80TE0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rpap1Q80TE0 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Rpap1Q80TE0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rpap1Q80TE0 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rpap1Q80TE0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC29.55■■■□□ 2.32
Rpap1Q80TE0 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC29.55■■■□□ 2.32
Rpap1Q80TE0 AC140264.2-202ENSMUST00000218746 817 ntBASIC29.55■■■□□ 2.32
Rpap1Q80TE0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rpap1Q80TE0 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Rpap1Q80TE0 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Rpap1Q80TE0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Rpap1Q80TE0 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rpap1Q80TE0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Rpap1Q80TE0 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC29.54■■■□□ 2.32
Rpap1Q80TE0 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
Rpap1Q80TE0 AC121577.1-201ENSMUST00000227302 707 ntBASIC29.54■■■□□ 2.32
Rpap1Q80TE0 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Rpap1Q80TE0 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC29.54■■■□□ 2.32
Rpap1Q80TE0 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC29.54■■■□□ 2.32
Rpap1Q80TE0 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Rpap1Q80TE0 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rpap1Q80TE0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC29.53■■■□□ 2.32
Rpap1Q80TE0 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC29.53■■■□□ 2.32
Rpap1Q80TE0 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC29.53■■■□□ 2.32
Rpap1Q80TE0 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Rpap1Q80TE0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rpap1Q80TE0 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC29.52■■■□□ 2.32
Rpap1Q80TE0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rpap1Q80TE0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC29.52■■■□□ 2.32
Rpap1Q80TE0 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rpap1Q80TE0 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rpap1Q80TE0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC29.52■■■□□ 2.32
Rpap1Q80TE0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC29.52■■■□□ 2.32
Rpap1Q80TE0 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Rpap1Q80TE0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rpap1Q80TE0 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC29.51■■■□□ 2.31
Rpap1Q80TE0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rpap1Q80TE0 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rpap1Q80TE0 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC29.51■■■□□ 2.31
Rpap1Q80TE0 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
Rpap1Q80TE0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Rpap1Q80TE0 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Rpap1Q80TE0 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms