Protein–RNA interactions for Protein: Q6ZWS4

Cnih3, Protein cornichon homolog 3, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih3Q6ZWS4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnih3Q6ZWS4 Gm9870-201ENSMUST00000063874 645 ntBASIC17.4■□□□□ 0.38
Cnih3Q6ZWS4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnih3Q6ZWS4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Cnih3Q6ZWS4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnih3Q6ZWS4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnih3Q6ZWS4 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnih3Q6ZWS4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnih3Q6ZWS4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cnih3Q6ZWS4 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Cnih3Q6ZWS4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cnih3Q6ZWS4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Gm10571-201ENSMUST00000097869 1638 ntBASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cnih3Q6ZWS4 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Gm5921-201ENSMUST00000075898 882 ntBASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.37■□□□□ 0.37
Cnih3Q6ZWS4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cnih3Q6ZWS4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cnih3Q6ZWS4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cnih3Q6ZWS4 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cnih3Q6ZWS4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cnih3Q6ZWS4 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cnih3Q6ZWS4 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cnih3Q6ZWS4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cnih3Q6ZWS4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cnih3Q6ZWS4 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cnih3Q6ZWS4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cnih3Q6ZWS4 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.33■□□□□ 0.37
Cnih3Q6ZWS4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.33■□□□□ 0.36
Cnih3Q6ZWS4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cnih3Q6ZWS4 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cnih3Q6ZWS4 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC17.33■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms