Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Gm43017-201ENSMUST00000198296 752 ntBASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Gm40848-201ENSMUST00000221998 324 ntBASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Kdm1aQ6ZQ88 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Kdm1aQ6ZQ88 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Kdm1aQ6ZQ88 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.85■□□□□ 0.93
Kdm1aQ6ZQ88 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Kdm1aQ6ZQ88 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Kdm1aQ6ZQ88 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Kdm1aQ6ZQ88 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kdm1aQ6ZQ88 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kdm1aQ6ZQ88 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Kdm1aQ6ZQ88 Gm38342-201ENSMUST00000195710 2980 ntBASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Kdm1aQ6ZQ88 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms