Protein–RNA interactions for Protein: Q6ZPZ3

Zc3h4, Zinc finger CCCH domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h4Q6ZPZ3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h4Q6ZPZ3 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Zc3h4Q6ZPZ3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Zc3h4Q6ZPZ3 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC21.18■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Zc3h4Q6ZPZ3 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h4Q6ZPZ3 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h4Q6ZPZ3 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Zc3h4Q6ZPZ3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm15847-201ENSMUST00000121417 1065 ntBASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm20472-201ENSMUST00000174403 1240 ntBASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Wnt10b-205ENSMUST00000226846 1204 ntBASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm43672-201ENSMUST00000199072 1731 ntBASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Zc3h4Q6ZPZ3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm6802-201ENSMUST00000167843 1983 ntBASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Zc3h4Q6ZPZ3 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.14■□□□□ 0.97
Zc3h4Q6ZPZ3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
Zc3h4Q6ZPZ3 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zc3h4Q6ZPZ3 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Zc3h4Q6ZPZ3 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Zc3h4Q6ZPZ3 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Zc3h4Q6ZPZ3 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Zc3h4Q6ZPZ3 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC21.12■□□□□ 0.97
Zc3h4Q6ZPZ3 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms