Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Rif1Q6PR54 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC15.96■□□□□ 0.15
Rif1Q6PR54 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.96■□□□□ 0.15
Rif1Q6PR54 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.96■□□□□ 0.15
Rif1Q6PR54 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Rif1Q6PR54 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
Rif1Q6PR54 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Rif1Q6PR54 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Timm23-208ENSMUST00000226683 750 ntBASIC15.94■□□□□ 0.14
Rif1Q6PR54 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Rif1Q6PR54 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Gm43073-201ENSMUST00000198200 1189 ntBASIC15.93■□□□□ 0.14
Rif1Q6PR54 Il17rd-202ENSMUST00000223942 2186 ntBASIC15.93■□□□□ 0.14
Rif1Q6PR54 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC15.93■□□□□ 0.14
Rif1Q6PR54 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Gm17807-201ENSMUST00000186869 298 ntBASIC15.92■□□□□ 0.14
Rif1Q6PR54 AW822252-206ENSMUST00000208904 237 ntBASIC15.92■□□□□ 0.14
Rif1Q6PR54 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Rif1Q6PR54 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.92■□□□□ 0.14
Rif1Q6PR54 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Rif1Q6PR54 Gm18669-201ENSMUST00000216049 778 ntBASIC15.92■□□□□ 0.14
Rif1Q6PR54 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rif1Q6PR54 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rif1Q6PR54 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rif1Q6PR54 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rif1Q6PR54 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rif1Q6PR54 Gm42545-201ENSMUST00000202755 922 ntBASIC15.91■□□□□ 0.14
Rif1Q6PR54 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rif1Q6PR54 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Rif1Q6PR54 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC15.91■□□□□ 0.14
Rif1Q6PR54 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Rif1Q6PR54 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Rif1Q6PR54 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC15.9■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms