Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Scaf4Q6PFF0 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.63■□□□□ 0.57
Scaf4Q6PFF0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf4Q6PFF0 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Scaf4Q6PFF0 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf4Q6PFF0 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.63■□□□□ 0.57
Scaf4Q6PFF0 Gm15546-201ENSMUST00000122095 826 ntBASIC18.63■□□□□ 0.57
Scaf4Q6PFF0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Scaf4Q6PFF0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Scaf4Q6PFF0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Scaf4Q6PFF0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Scaf4Q6PFF0 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf4Q6PFF0 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf4Q6PFF0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf4Q6PFF0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.62■□□□□ 0.57
Scaf4Q6PFF0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Scaf4Q6PFF0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Scaf4Q6PFF0 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.6■□□□□ 0.57
Scaf4Q6PFF0 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.59■□□□□ 0.57
Scaf4Q6PFF0 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scaf4Q6PFF0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scaf4Q6PFF0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Scaf4Q6PFF0 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
Scaf4Q6PFF0 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scaf4Q6PFF0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scaf4Q6PFF0 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.58■□□□□ 0.56
Scaf4Q6PFF0 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Scaf4Q6PFF0 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Scaf4Q6PFF0 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Scaf4Q6PFF0 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Scaf4Q6PFF0 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC18.58■□□□□ 0.56
Scaf4Q6PFF0 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Scaf4Q6PFF0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scaf4Q6PFF0 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Scaf4Q6PFF0 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Scaf4Q6PFF0 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.56■□□□□ 0.56
Scaf4Q6PFF0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scaf4Q6PFF0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Scaf4Q6PFF0 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.56■□□□□ 0.56
Scaf4Q6PFF0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms