Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.59■□□□□ 0.25
Slc46a1Q6PEM8 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc46a1Q6PEM8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc46a1Q6PEM8 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Slc46a1Q6PEM8 Gm7860-201ENSMUST00000121190 879 ntBASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Slc46a1Q6PEM8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
Slc46a1Q6PEM8 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc46a1Q6PEM8 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Slc46a1Q6PEM8 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Slc46a1Q6PEM8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc46a1Q6PEM8 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc46a1Q6PEM8 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
Slc46a1Q6PEM8 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Slc46a1Q6PEM8 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Slc46a1Q6PEM8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Gm20100-201ENSMUST00000209418 2272 ntBASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Gm6365-201ENSMUST00000054711 744 ntBASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc46a1Q6PEM8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Gm13534-201ENSMUST00000121169 513 ntBASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc46a1Q6PEM8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Gm10655-201ENSMUST00000098658 1397 ntBASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc46a1Q6PEM8 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc46a1Q6PEM8 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC16.52■□□□□ 0.24
Slc46a1Q6PEM8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Slc46a1Q6PEM8 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Slc46a1Q6PEM8 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Slc46a1Q6PEM8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a1Q6PEM8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a1Q6PEM8 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a1Q6PEM8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Slc46a1Q6PEM8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms