Protein–RNA interactions for Protein: Q6PE13

Prrt3, Proline-rich transmembrane protein 3, mousemouse

Predictions only

Length 971 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prrt3Q6PE13 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.85■□□□□ 0.77
Prrt3Q6PE13 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prrt3Q6PE13 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prrt3Q6PE13 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Prrt3Q6PE13 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Prrt3Q6PE13 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Prrt3Q6PE13 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
Prrt3Q6PE13 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prrt3Q6PE13 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prrt3Q6PE13 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prrt3Q6PE13 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prrt3Q6PE13 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Prrt3Q6PE13 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Prrt3Q6PE13 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.84■□□□□ 0.77
Prrt3Q6PE13 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.84■□□□□ 0.77
Prrt3Q6PE13 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prrt3Q6PE13 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Prrt3Q6PE13 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Prrt3Q6PE13 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Prrt3Q6PE13 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Prrt3Q6PE13 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
Prrt3Q6PE13 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prrt3Q6PE13 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prrt3Q6PE13 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prrt3Q6PE13 Gm26524-201ENSMUST00000192339 390 ntBASIC19.82■□□□□ 0.76
Prrt3Q6PE13 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC19.82■□□□□ 0.76
Prrt3Q6PE13 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Prrt3Q6PE13 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Prrt3Q6PE13 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.82■□□□□ 0.76
Prrt3Q6PE13 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Prrt3Q6PE13 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Prrt3Q6PE13 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Gm20760-201ENSMUST00000179197 648 ntBASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Gm44672-201ENSMUST00000206944 1098 ntBASIC19.8■□□□□ 0.76
Prrt3Q6PE13 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Prrt3Q6PE13 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Prrt3Q6PE13 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Prrt3Q6PE13 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms