Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Sp140Q6NSQ5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Sp140Q6NSQ5 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Sp140Q6NSQ5 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Sp140Q6NSQ5 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.15■□□□□ 0.66
Sp140Q6NSQ5 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Sp140Q6NSQ5 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Sp140Q6NSQ5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
Sp140Q6NSQ5 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Gm43060-201ENSMUST00000200621 289 ntBASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sp140Q6NSQ5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sp140Q6NSQ5 Gm2011-201ENSMUST00000203124 1263 ntBASIC19.13■□□□□ 0.65
Sp140Q6NSQ5 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sp140Q6NSQ5 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sp140Q6NSQ5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Sp140Q6NSQ5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC19.13■□□□□ 0.65
Sp140Q6NSQ5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sp140Q6NSQ5 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sp140Q6NSQ5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sp140Q6NSQ5 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Sp140Q6NSQ5 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sp140Q6NSQ5 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sp140Q6NSQ5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sp140Q6NSQ5 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sp140Q6NSQ5 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sp140Q6NSQ5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sp140Q6NSQ5 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sp140Q6NSQ5 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms