Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.07■□□□□ 0.96
Tpm4Q6IRU2 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Tpm4Q6IRU2 AC126028.2-201ENSMUST00000228100 1833 ntBASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
Tpm4Q6IRU2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Gm43182-201ENSMUST00000199476 2528 ntBASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Tpm4Q6IRU2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Gm10571-201ENSMUST00000097869 1638 ntBASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.04■□□□□ 0.96
Tpm4Q6IRU2 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tpm4Q6IRU2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Tpm4Q6IRU2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tpm4Q6IRU2 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Tpm4Q6IRU2 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.03■□□□□ 0.96
Tpm4Q6IRU2 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.03■□□□□ 0.96
Tpm4Q6IRU2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Tpm4Q6IRU2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Tpm4Q6IRU2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Tpm4Q6IRU2 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Tpm4Q6IRU2 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Tpm4Q6IRU2 Gm42900-201ENSMUST00000197184 2167 ntBASIC21.02■□□□□ 0.95
Tpm4Q6IRU2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Tpm4Q6IRU2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC21.01■□□□□ 0.95
Tpm4Q6IRU2 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Tpm4Q6IRU2 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Tpm4Q6IRU2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Tpm4Q6IRU2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tpm4Q6IRU2 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tpm4Q6IRU2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tpm4Q6IRU2 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Tpm4Q6IRU2 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.01■□□□□ 0.95
Tpm4Q6IRU2 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Serp2-204ENSMUST00000228055 705 ntBASIC21■□□□□ 0.95
Tpm4Q6IRU2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Tpm4Q6IRU2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tpm4Q6IRU2 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC20.99■□□□□ 0.95
Tpm4Q6IRU2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Tpm4Q6IRU2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Tpm4Q6IRU2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Tpm4Q6IRU2 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms