Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt39Q6IFX4 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Krt39Q6IFX4 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Gm12251-201ENSMUST00000117893 792 ntBASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt39Q6IFX4 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt39Q6IFX4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC20.84■□□□□ 0.93
Krt39Q6IFX4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt39Q6IFX4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt39Q6IFX4 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Krt39Q6IFX4 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC20.84■□□□□ 0.93
Krt39Q6IFX4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt39Q6IFX4 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt39Q6IFX4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt39Q6IFX4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Krt39Q6IFX4 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt39Q6IFX4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Krt39Q6IFX4 Gm43137-201ENSMUST00000198052 594 ntBASIC20.83■□□□□ 0.93
Krt39Q6IFX4 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt39Q6IFX4 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt39Q6IFX4 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt39Q6IFX4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt39Q6IFX4 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.83■□□□□ 0.92
Krt39Q6IFX4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt39Q6IFX4 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.82■□□□□ 0.92
Krt39Q6IFX4 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.82■□□□□ 0.92
Krt39Q6IFX4 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt39Q6IFX4 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 AC165080.2-201ENSMUST00000217491 1530 ntBASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt39Q6IFX4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt39Q6IFX4 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt39Q6IFX4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt39Q6IFX4 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Krt39Q6IFX4 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt39Q6IFX4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt39Q6IFX4 Gm27454-201ENSMUST00000185090 204 ntBASIC20.8■□□□□ 0.92
Krt39Q6IFX4 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt39Q6IFX4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt39Q6IFX4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt39Q6IFX4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt39Q6IFX4 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt39Q6IFX4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Krt39Q6IFX4 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.79■□□□□ 0.92
Krt39Q6IFX4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Krt39Q6IFX4 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Krt39Q6IFX4 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms