Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cep290Q6A078 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cep290Q6A078 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC19.45■□□□□ 0.7
Cep290Q6A078 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cep290Q6A078 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cep290Q6A078 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cep290Q6A078 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cep290Q6A078 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cep290Q6A078 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cep290Q6A078 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cep290Q6A078 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cep290Q6A078 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.44■□□□□ 0.7
Cep290Q6A078 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cep290Q6A078 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cep290Q6A078 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cep290Q6A078 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.44■□□□□ 0.7
Cep290Q6A078 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cep290Q6A078 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cep290Q6A078 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cep290Q6A078 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cep290Q6A078 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.44■□□□□ 0.7
Cep290Q6A078 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.43■□□□□ 0.7
Cep290Q6A078 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Cep290Q6A078 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
Cep290Q6A078 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cep290Q6A078 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cep290Q6A078 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.42■□□□□ 0.7
Cep290Q6A078 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cep290Q6A078 AA414768-201ENSMUST00000121924 1257 ntBASIC19.42■□□□□ 0.7
Cep290Q6A078 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cep290Q6A078 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cep290Q6A078 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cep290Q6A078 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC19.42■□□□□ 0.7
Cep290Q6A078 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cep290Q6A078 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cep290Q6A078 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Cep290Q6A078 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
Cep290Q6A078 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cep290Q6A078 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cep290Q6A078 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.42■□□□□ 0.7
Cep290Q6A078 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Cep290Q6A078 Gm9103-201ENSMUST00000119371 405 ntBASIC19.41■□□□□ 0.7
Cep290Q6A078 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cep290Q6A078 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cep290Q6A078 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.41■□□□□ 0.7
Cep290Q6A078 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.41■□□□□ 0.7
Cep290Q6A078 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC19.4■□□□□ 0.7
Cep290Q6A078 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cep290Q6A078 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cep290Q6A078 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.4■□□□□ 0.7
Cep290Q6A078 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cep290Q6A078 Gm5867-201ENSMUST00000063197 592 ntBASIC19.4■□□□□ 0.7
Cep290Q6A078 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cep290Q6A078 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cep290Q6A078 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cep290Q6A078 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Cep290Q6A078 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cep290Q6A078 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.39■□□□□ 0.69
Cep290Q6A078 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cep290Q6A078 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cep290Q6A078 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cep290Q6A078 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cep290Q6A078 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cep290Q6A078 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cep290Q6A078 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cep290Q6A078 Timm23-208ENSMUST00000226683 750 ntBASIC19.39■□□□□ 0.69
Cep290Q6A078 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cep290Q6A078 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cep290Q6A078 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cep290Q6A078 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms