Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a2Q64739 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a2Q64739 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a2Q64739 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a2Q64739 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Col11a2Q64739 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a2Q64739 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Col11a2Q64739 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC23.29■■□□□ 1.32
Col11a2Q64739 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC23.29■■□□□ 1.32
Col11a2Q64739 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Col11a2Q64739 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Gm16042-201ENSMUST00000204813 1247 ntBASIC23.28■■□□□ 1.32
Col11a2Q64739 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
Col11a2Q64739 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Col11a2Q64739 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC23.28■■□□□ 1.32
Col11a2Q64739 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col11a2Q64739 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col11a2Q64739 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col11a2Q64739 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
Col11a2Q64739 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col11a2Q64739 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Col11a2Q64739 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC23.27■■□□□ 1.32
Col11a2Q64739 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC23.27■■□□□ 1.32
Col11a2Q64739 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Col11a2Q64739 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col11a2Q64739 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Col11a2Q64739 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.27■■□□□ 1.31
Col11a2Q64739 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col11a2Q64739 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Col11a2Q64739 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
Col11a2Q64739 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col11a2Q64739 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col11a2Q64739 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Col11a2Q64739 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.26■■□□□ 1.31
Col11a2Q64739 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Col11a2Q64739 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC23.24■■□□□ 1.31
Col11a2Q64739 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Col11a2Q64739 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col11a2Q64739 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col11a2Q64739 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col11a2Q64739 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col11a2Q64739 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Col11a2Q64739 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Col11a2Q64739 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col11a2Q64739 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Col11a2Q64739 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC23.23■■□□□ 1.31
Col11a2Q64739 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC23.23■■□□□ 1.31
Col11a2Q64739 Gm7889-201ENSMUST00000185591 958 ntBASIC23.22■■□□□ 1.31
Col11a2Q64739 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC23.22■■□□□ 1.31
Col11a2Q64739 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Col11a2Q64739 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Col11a2Q64739 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Col11a2Q64739 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC23.22■■□□□ 1.31
Col11a2Q64739 Gm21814-202ENSMUST00000203277 873 ntBASIC23.22■■□□□ 1.31
Col11a2Q64739 Arhgef4-208ENSMUST00000211073 171 ntBASIC23.22■■□□□ 1.31
Col11a2Q64739 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col11a2Q64739 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Col11a2Q64739 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Col11a2Q64739 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC23.2■■□□□ 1.31
Col11a2Q64739 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.31
Col11a2Q64739 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col11a2Q64739 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Col11a2Q64739 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col11a2Q64739 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col11a2Q64739 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
Col11a2Q64739 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Col11a2Q64739 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Col11a2Q64739 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC23.19■■□□□ 1.3
Col11a2Q64739 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Col11a2Q64739 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col11a2Q64739 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Col11a2Q64739 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Col11a2Q64739 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col11a2Q64739 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Col11a2Q64739 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col11a2Q64739 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Col11a2Q64739 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col11a2Q64739 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.18■■□□□ 1.3
Col11a2Q64739 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col11a2Q64739 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Col11a2Q64739 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Col11a2Q64739 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Col11a2Q64739 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms